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80beats

Archive for February, 2011

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In Bird Flu-Swine Flu Hybrids, a Clue to What Makes a Super-Strain

Swine flu is not gone, and it is not stagnant. Though the public health scare about the 2009 swine flu pandemic subsided, the virus—like avian flu—remains in pockets of animals, shuffling its genes while hidden from the watchful eyes of virus experts. Virologists call this genetic switcheroo “reassortment,” and it’s how new and dangerous strains of flu snuck up on humankind in the past—and how they could do it again. This time, though, virologist Jinhua Liu and colleagues are trying to get a jump on the viruses.

For a new study in the Proceedings of the National Academy of Sciences today, this team of Chinese researchers simulated what could be a dire situation for humans: swine flu (H1N1) and avian flu (H9N2) together in one animal. When these flu strains are together they can exchange genetic material. So to test what that mixing might produce, Liu’s team swapped genes between the two and created 127 hybrid viruses, testing each on mice.

Eight of these hybrid strains turned out to be more virulent and dangerous in the mice than their parent strains of swine flu and bird flu. [National Geographic]

According to Dutch virologist Ab Osterhaus, we can’t be sure that these eight nasty strains are the ones that would hit humans hardest—animal studies aren’t perfect.

“Mice mirror, to a certain extent, what happens in humans,” he says, but they are not perfect model animals. Liu agrees. He plans to investigate how contagious his new viral blends are in guinea pigs and ferrets—animals whose respiratory system better reflects our own feverish battle with flu. [ScienceNOW]

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February 28th, 2011 Tags: bird flu, genetics, health policy, PNAS, public health, swine flu, viruses
by Andrew Moseman in Health & Medicine | 3 Comments » | RSS feed | Trackback >

News Roundup: Gmail Crashes, Fire Ant Invasions, & Scientists in Space

  • Who needs a vomit comet? The Southwest Research Institute (SwRI) in Colorado reached a deal with Virgin Galactic to send some of its scientists up on SpaceShipTwo’s suborbital flights, allowing them to conducts tests in weightlessness.
  • Fire ants may have originated in South America, but their home base for invading the world at large is right here in the United States. So says a new study of more than 2,000 fire ant colonies spread around the globe.
  • Gone in a flash: About 150,000 Gmail users woke up to find their mailboxes wiped clean—messages, folders, and all. Google is racing to recover the lost correspondences. In the meantime, this is a reminder of two things. First, you should back up your email. And second, Google is really, really big. Those 150,000 people represent just .08 percent of Gmail users.
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February 28th, 2011 Tags: gmail, Google, internet, roundup, Turing Test, Virgin Galactic
by Andrew Moseman in Journal Roundup, Space, Technology | 2 Comments » | RSS feed | Trackback >

Who Needs Twitter? Libyan Protesters Covertly Connect on Dating Website

“May your day be full of jasmine.” “My lady, how I want to climb this wall of silence.” “I LLLLLove you.” No, this isn’t the tortured verse of botanically inclined lovesick teens. It’s the coded poetry of revolution.

As uprisings spread across northern Africa this month, protesters lit up social networking sites with updates—even Egypt’s attempt to shut off the Internet couldn’t stop them completely. But in Libya, where the fight is getting hotter and hotter, few people use sites like Facebook or Twitter, and many would be afraid to write there openly. So protest leader Omar Shibliy Mahmoudi found a place where they could speak in code: dating sites.

Mahmoudi – leader of the Ekhtalef, or “Difference,” movement – acted as if he was looking for a wife under the profile name “Where is Miriam?” and sent coded love letters to spur people to revolution. Since men cannot talk to other men on the site, revolutionaries posed as women to make contact with Mahmoudi, taking on names such as “Sweet Butterfly,” “Opener of the Mountain,” “Girl of the Desert” and “Melody of Torture.” [Herald Sun]

Once Mahmoudi connected with his sham love interests on the website (called Mawada), they bantered in cryptic poetry to suss out the other’s feelings. The “jasmine” reference above is a nod of support to the ongoing Jasmine Revolution. The five L’s in “”I LLLLLove you” means that a person has five supporters with them.

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February 28th, 2011 Tags: Africa, Facebook, internet, Libya, social networking, Twitter
by Andrew Moseman in Technology | 4 Comments » | RSS feed | Trackback >

Cameras Catch Young Javan Rhinos, Boosting Hopes for a Comeback

Good news for one of the most endangered mammals on the planet: Cameras set up to track the rare Javan rhino in Indonesia have captured images of young calves, showing the species is still breeding.

“This is fantastic news because before these camera trap images surfaced, only 12 other Javan rhino births were recorded in the past decade,” WWF-Indonesia Ujung Kulon programme chief Adhi Hariyadi said. “The population in Ujung Kulon represents the last real hope for the survival of a species that is on the brink of extinction.” [AFP]

Scientists who track the species had feared that perhaps as few as 40 Javan rhinos remained. This video footage recorded in November and December of last year, as well as other observations, suggests that the population is probably a little larger now, but still only about 50.

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February 28th, 2011 Tags: endangered species, Indonesia, mammals, rhinos
by Andrew Moseman in Living World | 2 Comments » | RSS feed | Trackback >

Promising Cystic Fibrosis Drug Targets the Cause, Not the Symptoms

A study of an experimental drug from the company Vertex, called VX-770, successfully reduced lung problems in CF patients, and the company hopes to try for approval of the drug later this year. If all goes well, doctors may soon have their first drug to treat the cause of this devastating disease, instead of just combatting the symptoms.

Cystic fibrosis is a genetic disease that impairs lung and digestive function. In particular, the normally thin layer of mucus in the lungs thickens up and impairs breathing; this happens because patients have a faulty version of a protein that helps clear mucus.

About 1800 different mutations in the cystic fibrosis transmembrane conductance regulator (CFTR) gene have been implicated in the disease. The gene encodes a molecular channel that shuttles chloride ions across cellular membranes, and people with two mutated copies develop mucus-filled lungs susceptible to infection. Few patients live to see their 30s. In 1989, CF became the first disease pinned to a specific gene mutation, without the benefit of knowing the protein first. [Nature]

This newest test was a Phase III trail of Vertex’s drug, which was funded in part by the Cystic Fibrosis Foundation. The treatment goes after one major genetic mutations that causes the disease, called G551.

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February 25th, 2011 Tags: cystic fibrosis, drug companies, drugs, genes & health, lungs, mutation, pharmaceuticals, Vertex
by Andrew Moseman in Health & Medicine | 10 Comments » | RSS feed | Trackback >

Our Galaxy May Have 50 Billion Exoplanets–and It’s Still Making More


Young. Old. Scalding hot. Icy cold. Terrestrial midgets. Gas giants. As the cavalcade of planets spotted beyond our solar system continues to grow, we get to see worlds of all sorts—and we get to speculate on the staggering number of exoplanets that might inhabit just our own galaxy.

Today’s first piece of otherworldly news involves baby exoplanets. Astronomer Christian Thalmann says his team may have spotted planets in the process of forming around three different stars, the first time scientists have spotted the process in action.

An infant star forms from a collapsing cloud of dust and gas and gathers a dense, flat disk of material that rotates with the star like a record album. The material in the disk will eventually clump up into nascent planets. Theoretical models of planet formation predicted that those protoplanets should suck up more gas and dust with their gravity, clearing a wide gap in the otherwise solid disk. [Wired]

Peering at young stars like T Chamaeleontis (T Cha) LkCa15 and AB Auriga, Thalmann and colleagues saw those telltale gaps in the dusty rings (their study is forthcoming in the Astrophysical Journal Letters). The stars are much like our own sun, so these pictures of infant solar systems could resemble what our own looked like as a baby. But though the stars are nearby in cosmic terms—T Cha lies just 350 light years away—the gaps are faint enough that it’s difficult to tell for certain if newly forming planets, and not the influence of binary stars or other objects, are creating them.

If Thalmann’s team is right, catching the birth of new worlds would be a great scientific coup. Our galaxy, however, isn’t exactly hurting for planets.

(more…)

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February 25th, 2011 Tags: exoplanets, extraterrestrial life, Kepler, Milky Way, solar system, stars
by Andrew Moseman in Space | 28 Comments » | RSS feed | Trackback >

NASA’s Space Shuttle & Robot Astronaut Go Up, but Glory Stays Down

For NASA, this was a week of launches and lack of launches. The space shuttle Discovery successfully blasted off yesterday on its final mission, but NASA’s climate-watching Glory satellite, which was scheduled to launch on Wednesday, is still stuck on the ground.

With an estimated 40,000 viewers at the Kennedy Space Center, Discovery launched at 4:53:24 p.m. ET on Thursday. Its crew of six is bound for the International Space Station, after four months of delay due to fuel tank repairs.

“Discovery now making one last reach for the stars,” the Mission Control commentator said once the shuttle cleared the launch tower. [CBS News]

Also on board is the first ever space-bound humanoid robot: Robonaut 2, or R2. This robot resembles a human from the waist up, and may eventually take on tedious chores and complete station repairs that are too dangerous for humans. At it entered space the robot tweeted (via its earthly handlers): “I’m in space! HELLO UNIVERSE!!!”

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February 25th, 2011 Tags: Discovery, Glory, NASA, Robonaut 2, robots, space shuttle
by Patrick Morgan in Space, Technology | 3 Comments » | RSS feed | Trackback >

How Turtles Use Earth’s Magnetic Field To Navigate Ocean Voyages


From Ed Yong:

In 1996, a loggerhead turtle called Adelita swam across 9,000 miles from Mexico to Japan, crossing the entire Pacific on her way. Wallace J. Nichols tracked this epic journey with a satellite tag. But Adelita herself had no such technology at her disposal. How did she steer a route across two oceans to find her destination?

Nathan Putman has the answer. By testing hatchling turtles in a special tank, he has found that they can use the Earth’s magnetic field as their own Global Positioning System (GPS). By sensing the field, they can work out both their latitude and longitude and head in the right direction.

By testing turtle hatchlings in a tank surrounded by magnets he could control, Putman showed turtles could sense it if he reversed the magnetic field around them and would begin heading in the opposite direction.

For more about the experiment—and how turtles can travel so far at such high stakes with just magnetism to guide them—check out the rest of Ed’s post at Not Exactly Rocket Science.

Related Content:
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Not Exactly Rocket Science: Robins can literally see magnetic fields, but only if their vision is sharp
80beats: Did Earth’s Magnetic Field Have a Fast Flip-Flop?

Image: Wikimedia Commons

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February 25th, 2011 Tags: magnetic fields, migration, navigation, ocean, turtles
by Andrew Moseman in Environment, Living World | 4 Comments » | RSS feed | Trackback >

Found: Ancient Alaskan House—and Remains of a Child Cremated There


We know the Bering land bridge that appeared between Alaska and Russia at least 14,000 years ago would have allowed ancient people to cross over into America. But what were those people like? Scant evidence has turned up to reveal their lifestyle, but in the journal Science this week archaeologists report a new find—one that’s simultaneously insightful and a portrait of sadness. Ben Potter and colleagues found an 11,500-year-old house that was apparently the scene of the loss of a child, as the fire pit shows the skeletal remains of a person about three years of age.

The bones are the oldest human remains yet discovered in northern North America, and provide a remarkable glimpse into the lives of the earliest North American settlers…. Older human remains and temporary hunting camps and work sites have been found, but longer-term habitations are rare. Yet the child’s young age – it was about 3 years old – and the type of food remains found at the new site, suggest it was the summer home for a group that comprised at least women and young children. [New Scientist]

The place is called Upper Sun River, located in central Alaska. The child has been given the name Xaasaa Cheege Ts’eniin, or “Upward Sun River Mouth Child.”

Potter … and his colleagues discovered the outlines of the foundation of a circular house, including a scattering of stone tools and animal bones on the floor and traces of posts that may have held up the walls and roof. As the team reports in this week’s issue of Science, the center of the house was taken up with a large circular pit containing the fragmented, partially burnt bones of the child. [ScienceNOW]

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February 24th, 2011 Tags: Alaska, archaeology, cremation, human migration
by Andrew Moseman in Human Origins | 4 Comments » | RSS feed | Trackback >

Google Street View Runs Into Controversies in Switzerland and Israel

Last year, Google raised the ire of many when it confessed that its city-mapping Street View vehicles unintentionally gathered unencrypted Wi-Fi data as they rolled past people’s abodes. To fix its image and to fend off lawsuits, the company soon tightened its privacy policies and ensured that its Street View cars stopped collecting that information. But the controversies just won’t stop. Google is now trying to convince privacy-conscious Swiss officials to drop the country’s tight Street View restrictions, while security-conscious Israeli officials are concerned that the technology will help terrorists.

Twenty-seven countries have been partially mapped via Street View, a Google product that provides 360-degree panoramic views from ground level. The company creates these images by sending groups of camera-studded vehicles to various parts of the world to snap pictures as they drive.

Although Switzerland is home to one of Google’s largest offices outside the United States, the country has strict privacy laws that have prevented Google from loading new Street View images of Switzerland for the past year. On Thursday, Google petitioned a Swiss court to lift this ban. The search engine company told Switzerland’s Federal Administrative Court that its technology automatically conceals the identity of faces and license plates, and that it is no different from rival services.

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February 24th, 2011 Tags: Google, Google street view, internet, Israel, privacy, Switzerland, terrorism, weapons & security
by Patrick Morgan in Technology | 6 Comments » | RSS feed | Trackback >

In a First, Newborn Mice Regenerate Their Damaged Hearts

Even with 15 percent of their hearts removed, newborn mice possess the extraordinary ability to mend themselves, researchers report today in the journal Science. It’s the first time that mammals outside of the womb have shown the regenerative ability to repair the heart.

Only newborn mice could regenerate part of their hearts, and they lost this ability after about a week after birth. Still, the results were quite impressive: Olson’s team removed 15 percent of the heart one day after birth, and when the researchers checked up three weeks later, the whole heart was repaired in 99 percent of the mice. Until now, scientists had seen fish and amphibians regenerate heart tissue as adults, but only embryonic mammals had been spotted doing the same.

“When a person has a heart attack and heart muscle cells are lost, the heart loses pump function, causing heart failure and eventual death,” said Eric Olson, a molecular biologist at Southwestern Medical Centre in Dallas, Texas. “Now that we know that the mammalian heart indeed possesses the potential to regenerate, at least early in life, we can begin to search for drugs or genes or other things that might reawaken this potential in the adult heart of mice and eventually of humans.” [The Guardian]

First they have to understand what the newborn rodent’s bodies are up to. Initially, Olson and colleagues weren’t sure how the mice were mending themselves—with stem cells, or cells that had already become muscle cells. But the appearance of the cells gave them away, says Dr. Stephen Badylak, who wasn’t involved in the study.

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February 24th, 2011 Tags: heart, heart muscle cells, mammals, mice, regeneration, regenerative medicine
by Andrew Moseman in Health & Medicine | 6 Comments » | RSS feed | Trackback >

Finding Art in Science: See the Dazzling Winners of the Wellcome Awards

From across the pond comes a ravishing collection of scientific imagery. The Wellcome Collection, a London museum, has just announced the winners of its Wellcome Image Awards.

The 21 award winners, selected from images acquired by the Wellcome Collection over the last 18 months, were chosen both for their ability to enhance scientific understanding and for their aesthetic appeal. Many use colour to better illustrate hard-to-see features. [New Scientist]

This is the embryo of a cavefish at the age of five days. The glowing green (achieved by injecting an antibody against a calcium-binding protein) reveals the taste buds and nervous system.The <a href="http://en.wikipedia.org/wiki/Great_diving_beetle" target="_blank">great diving beetles</a>, the largest freshwater beetles in the U.K., have a problem--when you spend your time in the water, it's difficult to grip anything. As a solution, the male beetles possess these "suckers" on their forelegs and use them to hold onto females during mating.A honeybee revealed in close-up false color by scanning electron micrograph. For an even closer look at how a bee is built, check out DISCOVER's photo gallery <a href="http://discovermagazine.com/photos/18-alluring-alien-sights-of-bee-ultra-close-up" target="_blank">The Alluring and Alien Sights of a Bee in Ultra Close-Up</a>.As revealed by scanning electron micrograph, the wing of the superbly named Madagascan moon moth is covered in tiny scales.<br /><br />
<p style="padding-left: 30px;">It has spectacular wings and is also known for its long tail. As a result, it is also called the comet moth. The moon moth also has no mouth parts; all feeding is done in its caterpillar stage, which means it only lives ten days. [<a href="http://www.telegraph.co.uk/science/picture-galleries/8343477/Wellcome-Image-Awards-2011.html" target="_blank">The Telegraph</a>]</p>These glowing layers reveal the complex structure of the retina--the photoreceptive part of the eye--in a mouse at one month old. Freya Mowat of University College London combined six different images to achieve this level of detail.These bacteria look cool, but don't be fooled: They're the periodontal microorganisms that cause plaque on your teeth. <em>Capnocytophaga</em> and <em>Aggregatibacter</em> bacteria are growing on a plate in this picture. They were taken from a patient with advanced gum disease.Spike Walker lit up this curled ruby-tail wasp with two flashes to make its iridescence shine for this image. The colors reveal the wasp's anatomy: Its head and thorax glimmer in blue while its abdomen glistens in ruby red.Stare deep into the eye of this three-day-old <a href="http://en.wikipedia.org/wiki/Zebrafish" target="_blank">zebrafish</a> and you'll see its components beginning to form. The lens appears in yellow, the cells that have begun to turn into retinal neurons are in purple, and the cells that have yet to differentiate appear in red.

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80beats: Illustrations of HIV, Quasars & Fungi Win Science Visualization Challenge

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February 24th, 2011 Tags: art, bacteria, eyes, fish, insects, science images, teeth, wasps, Wellcome Collection
by Andrew Moseman in Living World, Physics & Math, Top Posts | No Comments » | RSS feed | Trackback >

How Sandfish Lizards Slither So Quickly Through the Sahara

Sandfish lizards jostle back and forth, bending their bodies into a slithery S-curve to swim through the sands of the Sahara. Like scorpions and several other native desert species, they long ago mastered the difficult art of moving through the myriad grains of a sandy expanse to escape predators or the blistering African sun. And now physicists are close to cracking their secrets.

Daniel Goldman’s team has been trying to figure out just how the sandfish lizards do it for years now; in 2009 they built a robot to simulate the creature’s slithering motion. This time, for a study in the Journal of the Royal Society Interface, the scientists tried to model the physics of an animal knocking around so many grains of sand and see how the lizards burrow with such efficiency.

The team found sine-wave-like movement allows the lizard, and their robot, to push forward in sand, but creating computer models for the experiments proved problematic. Simulating all of the tiny sand grains required a lot of money to purchase time on powerful computers. So, the team performed the same experiments using 3-millimeter-wide glass beads instead of sand. “We wanted something easy to simulate that had some predictive power. We got lucky, because it turned out [the lizard and robot] swim beautifully in the same way through larger glass beads,” Goldman said. [Wired]

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February 24th, 2011 Tags: Africa, lizards, locomotion, robots, Sahara, sand
by Andrew Moseman in Living World, Physics & Math | 1 Comment » | RSS feed | Trackback >

Supreme Court: No, You Can’t Sue Drugmakers Over Vaccine Injury Claims

If a vaccine injures a child, should the parents be allowed to sue in state court? That’s a question lawyers, vaccine makers, parents, and Congress have wrestled over for a quarter century. This week, the United States Supreme Court brought forth a ruling that keeps the status quo: No, you can’t.

The justices, voting 6-2, said a 1986 federal law preempts claims that a drugmaker should have sold a safer formulation of a vaccine. The law, designed to encourage vaccine production by limiting patient suits, channels most complaints into a company- financed no-fault system that offers limited but guaranteed payments for injuries shown to be caused by a product. [Bloomberg]

The case in question, which has been kicking around for nearly two decades, was brought by Russell and Robalee Bruesewitz on behalf of their daughter, Hannah. In 1992 she began experiencing seizures after receiving a diphtheria, pertussis and tetanus shot made by  Wyeth [part of Pfizer]. At the time, her parents tried to file a claim with that government-created system.

When a special Vaccine Court within the Court of Federal Claims ruled that her injuries couldn’t be linked with the vaccine, her parents tried to move the case to Pennsylvania state court. The Third Circuit Court of Appeals eventually ruled that the claim was pre-empted by federal law, a decision upheld by the Supreme Court. [Wall Street Journal]

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February 23rd, 2011 Tags: drug companies, legal matters, Supreme Court, vaccination, vaccines
by Andrew Moseman in Health & Medicine | 20 Comments » | RSS feed | Trackback >

520 Million-Year-Old “Walking Cactus” Could Be Forerunner of Arthropods


From DISCOVER blogger Ed Yong:

Around 520 million years ago, a walking cactus roamed the Earth. Its body had nine segments, each bearing a pair of armour-plated legs, covered in thorns. It was an animal, but one that looked more like the concoction of a bad fantasy artist. Jianni Liu from Northwest University in Xi’an discovered this bundle of spines and named it Diania cactiformis – the “walking cactus from Yunnan”. And she thinks that it sits at the roots of the most successful group of animals on the planet.

If Liu is right, Diania is one of the earliest relatives of the arthropods – the group that includes insects, spiders, crabs, and more. These species all share a segmented body, a hard external skeleton and jointed legs. They are life’s winners, the most diverse of all animal groups.

For plenty more about this weird ancient armored creature, check out the rest of Ed’s post at Not Exactly Rocket Science.

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80beats: Ancient Invertebrates May Have Formed Chains for Strength in Numbers

Image: Nature

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February 23rd, 2011 Tags: arthropods, Cambrian Period, fossils
by Andrew Moseman in Uncategorized | 29 Comments » | RSS feed | Trackback >

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