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	<title>Comments on: 50 million Neandertals (genetically)</title>
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	<link>http://blogs.discovermagazine.com/gnxp/2010/05/50-million-neandertals-genetically/</link>
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		<title>By: Jason Malloy</title>
		<link>http://blogs.discovermagazine.com/gnxp/2010/05/50-million-neandertals-genetically/#comment-21770</link>
		<dc:creator>Jason Malloy</dc:creator>
		<pubDate>Sun, 09 May 2010 14:19:20 +0000</pubDate>
		<guid isPermaLink="false">http://blogs.discovermagazine.com/gnxp/?p=4051#comment-21770</guid>
		<description>&lt;i&gt;&quot;Jason Malloy nails it when he says that Hawk himself is seeing the world through PC glasses&quot;&lt;/i&gt;

???

I didn&#039;t say this at all.</description>
		<content:encoded><![CDATA[<p><i>&#8220;Jason Malloy nails it when he says that Hawk himself is seeing the world through PC glasses&#8221;</i></p>
<p>???</p>
<p>I didn&#8217;t say this at all.</p>
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		<title>By: Afterthought</title>
		<link>http://blogs.discovermagazine.com/gnxp/2010/05/50-million-neandertals-genetically/#comment-21769</link>
		<dc:creator>Afterthought</dc:creator>
		<pubDate>Sun, 09 May 2010 12:49:55 +0000</pubDate>
		<guid isPermaLink="false">http://blogs.discovermagazine.com/gnxp/?p=4051#comment-21769</guid>
		<description>No, the problem is that even though, as a scientific hypothesis, differences between races is quite valid, it is taboo politically.

Not talking about something that is true doesn&#039;t make it untrue. The differences exist in the real world.

I&#039;m not going to debate the political implications; I  just want the record to be set straight whatever it may be.

Jason Malloy nails it when he says that Hawk himself is seeing the world through PC glasses: we also don&#039;t know just how many genes were transferred and then subsequently lost for lack of fitness advantage. We should all want to know what the function of the genes are that were preserved.</description>
		<content:encoded><![CDATA[<p>No, the problem is that even though, as a scientific hypothesis, differences between races is quite valid, it is taboo politically.</p>
<p>Not talking about something that is true doesn&#8217;t make it untrue. The differences exist in the real world.</p>
<p>I&#8217;m not going to debate the political implications; I  just want the record to be set straight whatever it may be.</p>
<p>Jason Malloy nails it when he says that Hawk himself is seeing the world through PC glasses: we also don&#8217;t know just how many genes were transferred and then subsequently lost for lack of fitness advantage. We should all want to know what the function of the genes are that were preserved.</p>
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		<title>By: Eric Johnson</title>
		<link>http://blogs.discovermagazine.com/gnxp/2010/05/50-million-neandertals-genetically/#comment-21768</link>
		<dc:creator>Eric Johnson</dc:creator>
		<pubDate>Sun, 09 May 2010 00:14:01 +0000</pubDate>
		<guid isPermaLink="false">http://blogs.discovermagazine.com/gnxp/?p=4051#comment-21768</guid>
		<description>Razib, thanks for that info.

Just to let people know, Hawks has had a second post up, addressing (and arguing against) &quot;alternate interpretations&quot; such as were described here, at Dienekes&#039;, and in Carl Zimmer&#039;s post. If I feel competent to say anything after reading Hawks, I will.</description>
		<content:encoded><![CDATA[<p>Razib, thanks for that info.</p>
<p>Just to let people know, Hawks has had a second post up, addressing (and arguing against) &#8220;alternate interpretations&#8221; such as were described here, at Dienekes&#8217;, and in Carl Zimmer&#8217;s post. If I feel competent to say anything after reading Hawks, I will.</p>
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		<title>By: Razib Khan</title>
		<link>http://blogs.discovermagazine.com/gnxp/2010/05/50-million-neandertals-genetically/#comment-21767</link>
		<dc:creator>Razib Khan</dc:creator>
		<pubDate>Sat, 08 May 2010 20:45:43 +0000</pubDate>
		<guid isPermaLink="false">http://blogs.discovermagazine.com/gnxp/?p=4051#comment-21767</guid>
		<description>eric, the admixture is distributed all across the genome, and lots of them are low frequency variants. less than 100 are fixed SNPs which introgressed or went up via drift or selection.</description>
		<content:encoded><![CDATA[<p>eric, the admixture is distributed all across the genome, and lots of them are low frequency variants. less than 100 are fixed SNPs which introgressed or went up via drift or selection.</p>
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		<title>By: Eric Johnson</title>
		<link>http://blogs.discovermagazine.com/gnxp/2010/05/50-million-neandertals-genetically/#comment-21766</link>
		<dc:creator>Eric Johnson</dc:creator>
		<pubDate>Sat, 08 May 2010 19:24:26 +0000</pubDate>
		<guid isPermaLink="false">http://blogs.discovermagazine.com/gnxp/?p=4051#comment-21766</guid>
		<description>Jason, the thing is, it&#039;s apparently not mere introgression, at least not according to Hawks. Hawks&#039; impression (found on his blog) is that there is a bunch of neutral stuff in there, rather than just some positively-selected loci toting their linkage-disequilibrium blocs/haplotypes along with them. How he can discern this, I&#039;m not sure.</description>
		<content:encoded><![CDATA[<p>Jason, the thing is, it&#8217;s apparently not mere introgression, at least not according to Hawks. Hawks&#8217; impression (found on his blog) is that there is a bunch of neutral stuff in there, rather than just some positively-selected loci toting their linkage-disequilibrium blocs/haplotypes along with them. How he can discern this, I&#8217;m not sure.</p>
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		<title>By: Alice</title>
		<link>http://blogs.discovermagazine.com/gnxp/2010/05/50-million-neandertals-genetically/#comment-21765</link>
		<dc:creator>Alice</dc:creator>
		<pubDate>Sat, 08 May 2010 16:07:01 +0000</pubDate>
		<guid isPermaLink="false">http://blogs.discovermagazine.com/gnxp/?p=4051#comment-21765</guid>
		<description>Turns Hitler&#039;s notion of racial purity on its head, doesn&#039;t it?</description>
		<content:encoded><![CDATA[<p>Turns Hitler&#8217;s notion of racial purity on its head, doesn&#8217;t it?</p>
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		<title>By: Sandgroper</title>
		<link>http://blogs.discovermagazine.com/gnxp/2010/05/50-million-neandertals-genetically/#comment-21764</link>
		<dc:creator>Sandgroper</dc:creator>
		<pubDate>Fri, 07 May 2010 13:57:56 +0000</pubDate>
		<guid isPermaLink="false">http://blogs.discovermagazine.com/gnxp/?p=4051#comment-21764</guid>
		<description>In the 1981 movie Quest for Fire, the Neandertals were white and the Cro Magnons were black, or at least dark. It was simultaneously ridiculous and quite good, for its time.</description>
		<content:encoded><![CDATA[<p>In the 1981 movie Quest for Fire, the Neandertals were white and the Cro Magnons were black, or at least dark. It was simultaneously ridiculous and quite good, for its time.</p>
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		<title>By: Sandgroper</title>
		<link>http://blogs.discovermagazine.com/gnxp/2010/05/50-million-neandertals-genetically/#comment-21763</link>
		<dc:creator>Sandgroper</dc:creator>
		<pubDate>Fri, 07 May 2010 13:06:43 +0000</pubDate>
		<guid isPermaLink="false">http://blogs.discovermagazine.com/gnxp/?p=4051#comment-21763</guid>
		<description>Jason, John Hawks is a self-acknowledged lumper, not a splitter, so he likely would say that. Well, he did, but maybe that&#039;s why.</description>
		<content:encoded><![CDATA[<p>Jason, John Hawks is a self-acknowledged lumper, not a splitter, so he likely would say that. Well, he did, but maybe that&#8217;s why.</p>
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		<title>By: Jason Malloy</title>
		<link>http://blogs.discovermagazine.com/gnxp/2010/05/50-million-neandertals-genetically/#comment-21762</link>
		<dc:creator>Jason Malloy</dc:creator>
		<pubDate>Fri, 07 May 2010 11:59:23 +0000</pubDate>
		<guid isPermaLink="false">http://blogs.discovermagazine.com/gnxp/?p=4051#comment-21762</guid>
		<description>Hawks sez: &quot;&lt;i&gt;Does this mean that Neandertals belong in our species, Homo sapiens? Yes. Interbreeding with fertile offspring in nature. That&#039;s the biological species concept. &lt;/i&gt;&quot;

Actually, the fact that Europeans and Neanderthals co-existed for 1000s of years in Europe, and yet Europeans show no more admixture than Asians (even despite the fact that they could&#039;ve &lt;i&gt;used&lt;/i&gt; far more alleles than the Asians) would seem to indicate that humans and Neanderthals did behave like separate species. No natural hybridization in overlapping range? Not same species. (&lt;i&gt;That&#039;s&lt;/i&gt; the biological species concept.) This is unsurprising given our deep phylogenic divergence, and the persistent, complex behavioral differences between Sapiens and Neanderthalensis.

Introgression doesn&#039;t demand a reliable behavior pattern, only a handful of one-off encounters. So introgression can&#039;t be used to argue for unity of species.</description>
		<content:encoded><![CDATA[<p>Hawks sez: &#8220;<i>Does this mean that Neandertals belong in our species, Homo sapiens? Yes. Interbreeding with fertile offspring in nature. That&#8217;s the biological species concept. </i>&#8221;</p>
<p>Actually, the fact that Europeans and Neanderthals co-existed for 1000s of years in Europe, and yet Europeans show no more admixture than Asians (even despite the fact that they could&#8217;ve <i>used</i> far more alleles than the Asians) would seem to indicate that humans and Neanderthals did behave like separate species. No natural hybridization in overlapping range? Not same species. (<i>That&#8217;s</i> the biological species concept.) This is unsurprising given our deep phylogenic divergence, and the persistent, complex behavioral differences between Sapiens and Neanderthalensis.</p>
<p>Introgression doesn&#8217;t demand a reliable behavior pattern, only a handful of one-off encounters. So introgression can&#8217;t be used to argue for unity of species.</p>
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		<title>By: XiXiDu</title>
		<link>http://blogs.discovermagazine.com/gnxp/2010/05/50-million-neandertals-genetically/#comment-21761</link>
		<dc:creator>XiXiDu</dc:creator>
		<pubDate>Fri, 07 May 2010 09:37:05 +0000</pubDate>
		<guid isPermaLink="false">http://blogs.discovermagazine.com/gnxp/?p=4051#comment-21761</guid>
		<description>So Africans are pure Homo sapiens, a little bit more than all other humans? That makes &#039;white power&#039; look even more ridiculous, evidential. Or is crossbreeding all at once going to be a desirable trait for all the racists out there?</description>
		<content:encoded><![CDATA[<p>So Africans are pure Homo sapiens, a little bit more than all other humans? That makes &#8216;white power&#8217; look even more ridiculous, evidential. Or is crossbreeding all at once going to be a desirable trait for all the racists out there?</p>
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		<title>By: Razib Khan</title>
		<link>http://blogs.discovermagazine.com/gnxp/2010/05/50-million-neandertals-genetically/#comment-21760</link>
		<dc:creator>Razib Khan</dc:creator>
		<pubDate>Fri, 07 May 2010 03:04:02 +0000</pubDate>
		<guid isPermaLink="false">http://blogs.discovermagazine.com/gnxp/?p=4051#comment-21760</guid>
		<description>in bjorn kurten&#039;s &lt;i&gt;dance of the tiger&lt;/i&gt; the neandertals are white and the cro-magnons are black (more specifically, kurten describes them in the in the afterward as looking like south asians, very dark skinned, but not necessarily african features).</description>
		<content:encoded><![CDATA[<p>in bjorn kurten&#8217;s <i>dance of the tiger</i> the neandertals are white and the cro-magnons are black (more specifically, kurten describes them in the in the afterward as looking like south asians, very dark skinned, but not necessarily african features).</p>
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		<title>By: Ray</title>
		<link>http://blogs.discovermagazine.com/gnxp/2010/05/50-million-neandertals-genetically/#comment-21759</link>
		<dc:creator>Ray</dc:creator>
		<pubDate>Fri, 07 May 2010 02:52:36 +0000</pubDate>
		<guid isPermaLink="false">http://blogs.discovermagazine.com/gnxp/?p=4051#comment-21759</guid>
		<description>It seems like in the past few years, most documentaries have properly depicted the neanderthals as white. What I&#039;m more curious about is the pigmentation of the contemporaneous Cro Magnons. I recall reading somewhere that the East Asian and European genes for pale skin are different, which would seem to imply that their common ancestral population had dark skin. Since the hypothesis is now that it was the common ancestor who interbred with Neanderthals, shouldn&#039;t the Cro Magnon&#039;s in these documentaries be black? I don&#039;t think I&#039;ve ever seen a depiction of Cro Magnon/ Neanderthal contact featuring dark skinned Cro Magnons. Is there a good reason for this?</description>
		<content:encoded><![CDATA[<p>It seems like in the past few years, most documentaries have properly depicted the neanderthals as white. What I&#8217;m more curious about is the pigmentation of the contemporaneous Cro Magnons. I recall reading somewhere that the East Asian and European genes for pale skin are different, which would seem to imply that their common ancestral population had dark skin. Since the hypothesis is now that it was the common ancestor who interbred with Neanderthals, shouldn&#8217;t the Cro Magnon&#8217;s in these documentaries be black? I don&#8217;t think I&#8217;ve ever seen a depiction of Cro Magnon/ Neanderthal contact featuring dark skinned Cro Magnons. Is there a good reason for this?</p>
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		<title>By: Jeff Dunetz</title>
		<link>http://blogs.discovermagazine.com/gnxp/2010/05/50-million-neandertals-genetically/#comment-21758</link>
		<dc:creator>Jeff Dunetz</dc:creator>
		<pubDate>Fri, 07 May 2010 01:12:07 +0000</pubDate>
		<guid isPermaLink="false">http://blogs.discovermagazine.com/gnxp/?p=4051#comment-21758</guid>
		<description>FINALLY! Something that can explain the birth of Keith Olbermann</description>
		<content:encoded><![CDATA[<p>FINALLY! Something that can explain the birth of Keith Olbermann</p>
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		<title>By: Eric Johnson</title>
		<link>http://blogs.discovermagazine.com/gnxp/2010/05/50-million-neandertals-genetically/#comment-21757</link>
		<dc:creator>Eric Johnson</dc:creator>
		<pubDate>Fri, 07 May 2010 00:49:03 +0000</pubDate>
		<guid isPermaLink="false">http://blogs.discovermagazine.com/gnxp/?p=4051#comment-21757</guid>
		<description>I adhere to the concept where taxa are good species if they are fated not to merge. If they have fertile hybrids, but the hybrids and even the backcrosses have sufficiently depressed fitness, then they ain&#039;t gonna merge; instead, a preference fro own-taxon mating will evolve expeditiously.

In reality, they are never quite 100% fated to stay apart - it&#039;s always probabilistic. It&#039;s somewhat contingent upon ecological conditions, which could change arbitrarily at any moment. But if they&#039;re highly likely to never fully merge, I&#039;d call them good species. If wolves and coyotes are amalgamating in a way that looks like it will probably go all the way, I call them one species.

Of course, using my species concept, there can be a gray area where the probability of mergation/non-mergation is not 5/95, nor 95/5, but something closer to 50/50. This gray area is ugly, and the classical biological species concept doesn&#039;t have a gray area. But &#039;my&#039; concept (which I&#039;d guess has been discussed a lot since before I was born) makes more sense on a large-scale diachronic view.

Heck, humans and chimps may even be interfertile, it has been speculated:
http://en.wikipedia.org/wiki/Humanzee</description>
		<content:encoded><![CDATA[<p>I adhere to the concept where taxa are good species if they are fated not to merge. If they have fertile hybrids, but the hybrids and even the backcrosses have sufficiently depressed fitness, then they ain&#8217;t gonna merge; instead, a preference fro own-taxon mating will evolve expeditiously.</p>
<p>In reality, they are never quite 100% fated to stay apart &#8211; it&#8217;s always probabilistic. It&#8217;s somewhat contingent upon ecological conditions, which could change arbitrarily at any moment. But if they&#8217;re highly likely to never fully merge, I&#8217;d call them good species. If wolves and coyotes are amalgamating in a way that looks like it will probably go all the way, I call them one species.</p>
<p>Of course, using my species concept, there can be a gray area where the probability of mergation/non-mergation is not 5/95, nor 95/5, but something closer to 50/50. This gray area is ugly, and the classical biological species concept doesn&#8217;t have a gray area. But &#8216;my&#8217; concept (which I&#8217;d guess has been discussed a lot since before I was born) makes more sense on a large-scale diachronic view.</p>
<p>Heck, humans and chimps may even be interfertile, it has been speculated:<br />
<a href="http://en.wikipedia.org/wiki/Humanzee" rel="nofollow">http://en.wikipedia.org/wiki/Humanzee</a></p>
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		<title>By: Razib Khan</title>
		<link>http://blogs.discovermagazine.com/gnxp/2010/05/50-million-neandertals-genetically/#comment-21756</link>
		<dc:creator>Razib Khan</dc:creator>
		<pubDate>Thu, 06 May 2010 23:44:25 +0000</pubDate>
		<guid isPermaLink="false">http://blogs.discovermagazine.com/gnxp/?p=4051#comment-21756</guid>
		<description>longman, it depends on which species concept you adhere to i&#039;d guess. also, re: dogs and wolves, these two lineages separated far more recently in time than sapiens sapiens and sapiens neandertalis did.

personally, i don&#039;t think it is important whether x and y belong to different species because i don&#039;t think of species as metaphysical entities, like creationists believe with &quot;kinds.&quot; it&#039;s just shorthand to describe other things, like genetic distance or occupation of different niches in the same ecology, etc.</description>
		<content:encoded><![CDATA[<p>longman, it depends on which species concept you adhere to i&#8217;d guess. also, re: dogs and wolves, these two lineages separated far more recently in time than sapiens sapiens and sapiens neandertalis did.</p>
<p>personally, i don&#8217;t think it is important whether x and y belong to different species because i don&#8217;t think of species as metaphysical entities, like creationists believe with &#8220;kinds.&#8221; it&#8217;s just shorthand to describe other things, like genetic distance or occupation of different niches in the same ecology, etc.</p>
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		<title>By: LongMa</title>
		<link>http://blogs.discovermagazine.com/gnxp/2010/05/50-million-neandertals-genetically/#comment-21755</link>
		<dc:creator>LongMa</dc:creator>
		<pubDate>Thu, 06 May 2010 23:42:14 +0000</pubDate>
		<guid isPermaLink="false">http://blogs.discovermagazine.com/gnxp/?p=4051#comment-21755</guid>
		<description>Why do they have to be the same species if they have viable offspring?  There are many species that can produce inter-species viable offspring.  Look at Canid mixes that are possible and viable:
http://en.wikipedia.org/wiki/Canid_hybrid

We don&#039;t consider Wolves and Dogs the same species as Coyote.  Dogs and Wolves are generally considered subspecies, similar to Human and Neanderthals.   There are other examples as well.</description>
		<content:encoded><![CDATA[<p>Why do they have to be the same species if they have viable offspring?  There are many species that can produce inter-species viable offspring.  Look at Canid mixes that are possible and viable:<br />
<a href="http://en.wikipedia.org/wiki/Canid_hybrid" rel="nofollow">http://en.wikipedia.org/wiki/Canid_hybrid</a></p>
<p>We don&#8217;t consider Wolves and Dogs the same species as Coyote.  Dogs and Wolves are generally considered subspecies, similar to Human and Neanderthals.   There are other examples as well.</p>
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		<title>By: Neandertal Genome Draft Published &#171; Tiny Science</title>
		<link>http://blogs.discovermagazine.com/gnxp/2010/05/50-million-neandertals-genetically/#comment-21754</link>
		<dc:creator>Neandertal Genome Draft Published &#171; Tiny Science</dc:creator>
		<pubDate>Thu, 06 May 2010 21:54:54 +0000</pubDate>
		<guid isPermaLink="false">http://blogs.discovermagazine.com/gnxp/?p=4051#comment-21754</guid>
		<description>[...] mating angle (somehow I knew this would be the most interesting bit) and some of the less salacious insights, as well as a long and insightful post summing up most of the main points of both papers and [...] </description>
		<content:encoded><![CDATA[<p>[...] mating angle (somehow I knew this would be the most interesting bit) and some of the less salacious insights, as well as a long and insightful post summing up most of the main points of both papers and [...] </p>
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		<title>By: Razib Khan</title>
		<link>http://blogs.discovermagazine.com/gnxp/2010/05/50-million-neandertals-genetically/#comment-21753</link>
		<dc:creator>Razib Khan</dc:creator>
		<pubDate>Thu, 06 May 2010 20:44:31 +0000</pubDate>
		<guid isPermaLink="false">http://blogs.discovermagazine.com/gnxp/?p=4051#comment-21753</guid>
		<description>&lt;i&gt; I saw “At Play in the Fields of the Lord” on TV once, and they had edited out some Daryl Hannah nudity while leaving plenty of topless South American natives in.&lt;/i&gt;

naked animals aren&#039;t sexual (i think that&#039;s the implicit model being exposed here, and it doesn&#039;t have a left-right difference).</description>
		<content:encoded><![CDATA[<p><i> I saw “At Play in the Fields of the Lord” on TV once, and they had edited out some Daryl Hannah nudity while leaving plenty of topless South American natives in.</i></p>
<p>naked animals aren&#8217;t sexual (i think that&#8217;s the implicit model being exposed here, and it doesn&#8217;t have a left-right difference).</p>
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		<title>By: Mike Keesey</title>
		<link>http://blogs.discovermagazine.com/gnxp/2010/05/50-million-neandertals-genetically/#comment-21752</link>
		<dc:creator>Mike Keesey</dc:creator>
		<pubDate>Thu, 06 May 2010 20:13:49 +0000</pubDate>
		<guid isPermaLink="false">http://blogs.discovermagazine.com/gnxp/?p=4051#comment-21752</guid>
		<description>On that last topic, I saw &quot;At Play in the Fields of the Lord&quot; on TV once, and they had edited out some Daryl Hannah nudity while leaving plenty of topless South American natives in.</description>
		<content:encoded><![CDATA[<p>On that last topic, I saw &#8220;At Play in the Fields of the Lord&#8221; on TV once, and they had edited out some Daryl Hannah nudity while leaving plenty of topless South American natives in.</p>
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