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Darwinius: Science, Showbiz, and Conflicts of Interest

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The story of Darwinius masilae continues…

In our previous chapter, we noted that the scientists who described this fossil claimed “no competing interests exist,” ignoring the fact that the fossil was the center of a spectacular media circus that included a heavily financed TV documentary. I contacted Peter Binfield of PLOS One, where the paper was published, and asked for a comment. He said he was contacting the authors and would get back to me.

He has.

The paper is going to be formally corrected, and in the interim the following statement has been posted to the comment section on the paper’s website:

“The authors wish to declare, for the avoidance of any misunderstanding concerning competing interests, that a production company (Atlantic Productions), several television channels (History Channel, BBC1, ZDF, NRK) and a book publisher (Little Brown and co) were involved in discussions regarding this paper in advance of publication. However, to clarify, none of the authors received any financial benefit from any of these associations and these organizations had no influence over the publication of this paper or the science contained within it. The Natural History museum in Oslo will receive some royalty from sales of the book, but no revenue accrues to any of the scientists. In addition, the Natural History Museum of Oslo purchased the fossil that is examined in this paper, however, this purchase in no way influenced the publication of this paper or the science contained within it, and in no way benefited the individual authors.”

I’m no expert in the ethics of fossils and museums, and so I’ll need to ponder this statement a while before commenting. In the meantime, let me throw this one out to those in the know. What do you think? Is this kosher?

June 10th, 2009 2:37 PM by Carl Zimmer in Darwinius, Meta | 11 Comments » | RSS feed | Trackback >

Big Ratings For Darwinius Day. So How Was It, Cable-Viewers?

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Monday night, Darwinius masilae (a k a Ida) had her television debut on The Link, which aired on the History Channel. A lot of people saw it, says Broadcasting & Cable in a surprisingly accurate article, which managed to do a better job on the scientific side of the story than a lot of regular media outlets:

Controversy Helps ‘The Link’ Boost History–Draws 2 million viewers Monday night

By Alex Weprin — Broadcasting & Cable, 5/26/2009 1:39:59 PM MT

The Link, a History special about the recently revealed 47 million year old fossil Ida, drew 2 million viewers Monday night, according to Nielsen Fast Cable ratings. That is up 67% compared to History’s prime average.The special also drew 904,000 P25-54 and 756,000 P18-49.

Ida–and the History special–was announced just a few weeks ago at the American Museum of Natural History in New York City and in journal PLoS One. Since then, the fossil, which could be the earliest known mammalian ancestor of man, linking Anthropoids (a group which include humans) with earlier groups of primates, has been extensively covered in the media.

While the History special is dubbed The Link, implying the fossil is a so called “missing link” in human evolution, many science journalists have criticized that interpretation, arguing that there cannot be a single “missing link” and that at best the fossil adds to the already strong literature on human evolution, and at worst may not be a part of humanity’s evolutionary history at all.

I gave up cable some years ago, a bit like an alcoholic going clean and sober. So I was not among the two million who saw the show Monday, and I haven’t seen it turn up on the web since then. I’ve been trying to get a sense of it from other people’s reactions on the web. But it’s hard to judge the show based on the reactions of people who are already steeped in paleontology. After all, television, like newspapers, should be directed to the public at large. I think it’s good if a show about science makes scientists or science buffs a bit impatient or bored.

The catch is that in trying to reach as wide an audience as possible, television producers sometimes start making stuff up. Certainly the hype ginned up last week over Darwinius was packed with plenty of nonsense. But sometimes a show and its publicity are very different. What’s the case here?

Update: When I say “big ratings,” I realized after posting this, I may be suffering the soft prejudice of low expectations. Two million is a high number for the History Channel, but not for Nova on PBS. And it’s really low compared to “Jon and Kate Plus Eight,” which aired the same night as “The Link.” The most important fossil ever ever ever can’t compete with a screwed up family, I guess.

May 27th, 2009 9:20 AM by Carl Zimmer in Darwinius, Meta | 14 Comments » | RSS feed | Trackback >

May 25 Is Darwinius Day, The Most Important Day IN 47 MILLION YEARS!

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A friend passed on this ad that aired for “The Link,” the show about Darwinius on May 25. Take a look.

Yep. That’s right. May 25 will be more important than 9/11. Than Pearl Harbor. Than every date in human history. Pre-human, too.

Let this be the starting point from now on for all discussions of science hype.

Update: A commenter asked if this was a spoof. It’s not. This is a real ad for the show.

Update #2: The TV producers who passed on this video to me are now wondering if this particular piece is actually some kind of mash-up, using an original teaser ad and encrusting it with even more over-the-top-itude. Are there any YouTube-ologists who can parse such things? Take a look at this and this and this and, in particular, this, which was posted by someone who suspected it was a semi-hoax.

If I had to guess, the original ad, which aired on or around May 14, was a series of historic dates (including 9/11–classy!) with voiceovers, ending with Darwinius Day (which from now on will be the day I celebrate beautiful fossils by hyperventilating into a paper bag).

Then somebody decided the ad was so ridiculous that he or she had to take it up an extra crazy notch–grafting some of the original design from the History Channel web site. If my hypothesis is correct, there is one seriously funny amateur video editor out there.

Question: did anyone see the original on TV?

May 22nd, 2009 11:20 AM by Carl Zimmer in Darwinius, Evolution, Meta | 51 Comments » | RSS feed | Trackback >

Science Held Hostage, Updated

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Just a quick note–I’ve updated my post on the Darwinius affair. The journal where the paper was published has responded to my enquiries. They say the authors of the paper were responsible for the secrecy over the paper.

May 21st, 2009 10:40 PM by Carl Zimmer in Darwinius, Evolution, Meta | No Comments » | RSS feed | Trackback >

Darwinius: Named at Last!

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In a remarkable feat of commenter-blogger synergy, the Loom has helped give Darwinius its name back.

As I posted yesterday, some commenters on the Loom pointed out that, amidst all the hullaballoo over the unveiling of this primate fossil (oh, don’t get me started), it looked as if the scientists who wrote the paper failed to follow the rules for naming a new species. The people who make the rules (the International Commission on Zoological Nomenclature) require paper copies of a scientific paper, not just a digital one, as was the case of Darwinius.

Today, the executive secretary of the ICZN used the Loom to confirm that, yes, Darwinius was not yet Darwinius.

But at last, it is. Here’s an update from Peter Binfield, the managing editor of Plos ONE, the journal that published the paper.

Regarding the requirements for making the name Darwinius masillae nomenclaturally available in the eyes of the ICZN, we have been in discussion with Ellinor Michel (the ICZN Executive Secretary) and have additionally consultated with Richard L. Pyle (an ICZN Commissioner). They have advised us that by doing the following, we have met the ICZN code and therefore the name should be considered nomenclaturally available.

A print-run of fifty copies of the paper has been created on May 21st. The top sheet of each copy has the following text appended to the footer: “This document was produced by a method that assures numerous identical & durable copies, and those copies were simultaneously obtainable for the purpose of providing a public and permanent scientific record, in accordance with Article 8.1 of the International Code of Zoological Nomenclature. Date of publication: 21st May 2009”

Apart from this wording, these copies are identical to the electronic version that is freely available from our web site at: http://www.plosone.org/article/fetchObjectAttachment.action?uri=info%3Adoi%2F10.1371%2Fjournal.pone.0005723&representation=PDF

These copies are now obtainable from our offices at 185 Berry Street, Suite 3100, San Francisco, CA 94107, USA. Anyone who requests a copy, and tenders a fee of $10 (towards the cost of postage and printing) will receive a copy.

Having made the printed copies available, we have been told by the individuals named above that we have conformed with the relevant ICZN codes. They have also indicated that the proposed resolution is an interim step, which should meet the requirements of the Code until a formal amendment is published within the next few years.

We are very grateful to the ICZN for their actions to resolve this matter.

Richard Pyle of the ICZN thought that Peter’s update required a small clarification, which he just sent in:

The pending proposed Amendment to the ICZN Code for allowing electronic forms of publication (see: http://www.iczn.org/electronic_publication.html) is currently in review, as is required for all such major amendments to the Code.  This process will likely be completed within the next year, and if adopted, the amendment should go into effect at that time.

What will require “a few years” to be published is the next (Fifth) Edition of the ICZN Code (see: http://iczn.ansp.org ). Presumably, this Edition of the Code will also support the electronic publication of nomenclatural acts (especially if the proposed amendment to the existing 4th Edition of the Code is approved).

To those not steeped in species, genera, suborders and suprafamilies, all of these bylaws and codes may trigger vertigo. But keeping the world’s biodiversity in order is not for the faint of heart. With 1.8 million species on the books, and tens of thousands of new ones being added every year, taxonomists need an intricate set of rules to keep it all straight. The fact that taxonomists share a set of rules, no matter how intricate, was one of the great advances in the history of biology. (See my lecture [audio] for a sense of the chaos that came before.)

But who knows how Linneaus would have dealt with the Internet….

May 21st, 2009 8:07 PM by Carl Zimmer in Darwinius, Evolution, Meta | 15 Comments » | RSS feed | Trackback >

Science Held Hostage

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darwinius220.jpgSometimes big movie production companies decide that they’d be better off not showing a movie in advance to the critics. They know that the reviews would probably do more harm than good. Looking back on the the Darwinius affair, I’m starting to wonder if the unveiling of this fossil was stage-managed in the same way.

I only started looking into the story after observing all the bizarre publicity around it. And as I’ve probed this strange media event, I’ve gotten some interesting information from reporters who were on the Darwinius beat. It makes for a disturbing timeline:

May 10: The Daily Mail gets wind of the fossil and the show that will be broadcast about it.

Ann Gibbons, a Science correspondent, wants to get her hands on the paper.  “I struggled in vain all last week to get a copy of the article,” she emailed me this morning. PLOS will not give her the paper, which will not be published until May 19, the same day as a major press conference on the fossil.

May 15: The Wall Street Journal gets a fairly long interview with one of the co-authors of the Darwinius paper (who apparently thought the conversation was off the record)

May 16: Gibbons, having failed to get the paper from PLOS, convinces the producers of the the documentary on  Darwinius, Atlantic Productions, to give it to her. In order to get it, she signs a non-disclosure form agreeing not to show it to anyone until 10:30 am on May 19, the day of the press conference. But she does not get the paper until Monday.

May 18: Gibbons finally gets the paper Monday afternoon, the day before the press conference. But she cannot show it to any experts due to her non-disclosure agreement.

May 19: At 10:40 am, I (and many other reporters) get a press release from PLOS about Darwinius. The press release has a link that lets us download the paper, and there is no embargo on it. In other words, we can start writing about it right away. But the email arrives right before the press conference at the American Museum of Natural History where Darwinius is unveiled to a swarm of reporters. The web is almost immediately flooded with reports on Darwinius, based only on the press conference.

As the day progresses, I am puzzled by the lack of outside commentary in articles on Darwinius. The articles I encounter only have quotes from the co-authors of the paper saying how important it is, and television producers telling us how this is going to change everything. (On a related note, the sky is still blue today.)

Not realizing the kind of constraints reporters like Gibbons were under, I decide to get in touch with experts myself and see what they think. Short answer: cool fossil, not a “missing link,” and a paper with some shortcomings.

In the comments section of my own post, AP science reporter Malcolm Ritter had this to say today:

As the reporter who covered this story for The Associated Press, I’d like to point out two things: 1. Major journals generally make upcoming papers available to reporters a few days ahead of publication so we can get independent comment for our stories. But PLoS ONE withheld the Darwinius paper until 10 minutes after the Hurum press conference began (judging by the time stamp on the PLoS email to me). So reporters had nothing to show outside experts to solicit some perspective before Hurum et al. started talking. 2. Carl, you said you never found a news story that had comments from independent experts. I’m not sure when you checked, but my story quoting both Beard and Fleagle went out at 4:40 p.m. (It replaced a preliminary version that I’d written off the press conference. I’d contacted both men beforehand an arranged to speak after we’d all seen the paper).

Indeed, by the time Malcolm updated his article, I had given up hope of finding comments from indepentent experts and was doing my own blogging. I apologize for implicitly kicking dirt on the work of Ritter and other diligent journalists.

So, to recap: it appears that both PLOS and Atlantic Productions did not give journalists any time to consult with outside experts before launching a major press conference with a huge blitz of media attention. In other words, science writers who were trying to do their job well and responsibly were actively hindered. Those who declared ridiculous things, such as claiming that human origins were now solved once and for all, were not.

I have a hard time even imagining how this behavior could be justified. I’ve sent emails to the contacts listed in the PLOS press release on Darwinius both at PLOS and Atlantic Productions to ask why they took this course of action.

I’ve yet to get a response.

Update #1: This article in the Australian was brought to my attention after I published this post, with quite a quote from co-author Phil Gingerich:

“There was a TV company involved and time pressure. We’ve been pushed to finish the study. It’s not how I like to do science.”

Update #2: Peter Binfield from PLOS has responded:

I am the Managing Editor of PLoS ONE. This paper was originally submitted to us on March 19th 2009 and underwent appropriate scrutiny by an Academic Editor (named on the published article) and three expert peer reviewers. Peer review comments were returned to the authors who revised their paper accordingly and the paper was ultimately accepted on May 12th 2009. These dates are available on the paper itself.

Once the paper was accepted we made a strenuous effort to publish the article in time for the Press Conference which was happening on May 19th – only a week later. We were not involved in the Press Conference, but felt it was clearly in the public interest to have the article publicly available in time for that conference. Our production team managed to get the article published more than two weeks quicker than normal, so that it would be ready for the 19th. However, it was only on the afternoon of the 18th May that we knew the paper would definitely be available in time and until that point, no final copy of the paper was available.

We do regularly help PLoS ONE authors with the distribution of press releases under an embargo, as do many other journals, but when we do this we only ever issue that information on a date that is acceptable to the authors. The authors of this paper requested that we did not issue a press release, or reveal any other information about this paper, until 10.30 EST on the 19th May (the time of the press conference). We respected their wishes, and at the time of publication also issued our own press release about this article.

We are delighted to have published this work, which has clearly captured the imagination and attention of researchers, the media and the public. The paper has been discussed, scrutinized, praised and criticized, and is a terrific example of why open access to research is so beneficial.

I’m curious what scientists, journal editors, reporters, and other readers think of Binfield’s response. Other prominent journals don’t leave these matters up to the scientists (or their television producer pals). They inform the scientists of which issue a paper is scheduled for, and they put the paper on a press list a few days earlier.

Now, I know that PLoS ONE is unusual in a lot of ways. For one thing, they don’t reject papers for not being of sufficient importance. They state, “Judgments about the importance of any particular paper are then made after publication by the readership (who are the most qualified to determine what is of interest to them).” But does that mean they should also go along with an embargo from their authors that hinders good reporting on the papers?

In any case, I have yet to hear from the television producers. Given PLoS One’s response, I’m more curious than ever to hear from them.

Update #3 (Friday morning):

Still no word from Atlantic Productions. But, as a consolation prize, here’s quite a tale from journalist Mark Henderson of the Times of London (Note: Atlantic Productions is based in Britain):

…the PLoS paper WAS made available under embargo to the press — but only to selected individuals and under very unusual restrictions. I was invited to read it by Atlantic Productions on Tuesday morning (I’m Science Editor of The Times in London), but I had to go to their offices to read it and wasn’t allowed to take a copy away. I also had to sign a non-disclosure agreement, which meant I wasn’t able to approach anyone else for comment until the embargo lifted. The Guardian also had advance access (they got to see more in advance than we did, and earlier). So — obviously because they bought the film rights — did the BBC. But other UK papers (Independent, Telegraph etc) got nothing. This is a very weird (and in my experience unprecedented) way to manage the release of published science.

Update #4: Ann Gibbons sent in this point of clarification as a comment, but for some reason comments have stopped being posted. (I’m on it…)

In response to Hank Campbell, no. 6, PLOS and Atlantic didn’t withhold the paper from me as a backlash to AAAS, which publishes Science. They withheld it from all reporters, and in fact, Atlantic Productions did me a small favor–they called me at home on Saturday night, 5/16 to respond to my request for the paper and after signing a non-disclosure agreement, I was given a copy the evening before the embargo lifted, which helped me a bit. In the meantime, like Carl, I called the authors and other leading paleontologists to find out what they knew. But I was prevented by the embargo from printing details that I gleaned about the paper, and no self-respecting researcher will comment about a paper without reading it. We wrote two blogs about the hype last week, but could not post a story with independent scientists’ reactions until Tuesday afternoon and the 29 May issue of Science (see: http://sciencenow.sciencemag.org/cgi/content/full/2009/519/1)

May 21st, 2009 1:55 PM by Carl Zimmer in Darwinius, Evolution, Meta | 41 Comments » | RSS feed | Trackback >

Let Us Not Forget The Books: I Need Your Vote Again

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Today I’ve got an interview posted over at Yale Environment 360 with Tony Barnosky, a paleontologist who’s just written a very interesting book called Heatstroke: Nature in an Age of Global Warming. He gazes into a fossiliferous crystal ball to get an idea of what global warming will do to the world’s biodiversity. Short answer: it won’t be pretty.

bookstack220.jpgWhich brings me to the subject of books. I love books about science. That’s why I can’t stop writing them. I also like to get my hands on science books, in order to keep up with new ideas. In some cases I even turn a book into the subject of an article. But it always give me a pang to get a book that an author has worked hard on for a long time and realize that I won’t have time to spread the word about it. What little time I have left over when I’m not writing or reading for my own projects goes to my family or to my 20-year project to finish reading War and Peace all the way to the end. I’m jealous of speed readers who sit down for a cup of coffee and a book, and who stand up a little while later finished with both. That’s why I shy away from book reviews–to pass judgment on someone’s book demands a lot of time that I can’t spare.

And yet the pile of books just keeps getting taller. These are the books I got over the past month. I’ll donate the hardcover copies to the public library, but that doesn’t seem like enough. So I’ve been pondering some realistic possibilities for getting more books into the blog. I’m just wondering what would be most useful for you readers. I’ve laid out a few possibilities below in a poll. Please cast your vote. Thanks.



May 20th, 2009 11:21 AM by Carl Zimmer in Meta | 17 Comments » | RSS feed | Trackback >

Darwinius: It delivers a pizza, and it lengthens, and it strengthens, and it finds that slipper that’s been at large under the chaise lounge for several weeks…

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darwinius440.jpgIf the world goes crazy for a lovely fossil, that’s fine with me. But if that fossil releases some kind of mysterious brain ray that makes people say crazy things and write lazy articles, a serious swarm of flies ends up in my ointment.

On Friday, a reporter at the Wall Street Journal got a scoop on a new paper on a 47-million-year-old primate fossil that was published today in PLOS One. The story mentioned that the discovery would be revealed at the American Museum of Natural History. It did not mention that the fossil was also the ceneterpiece of a show on the History Channel, along with a big web site and a book–all called “The Link. Yesterday and today there have been a torrent of news articles on the new primate, dubbed Darwinius masillae. Publications that normally wouldn’t give two picas to paleontology, such as New York Magazine and Gawker jumped on the bandwagon.

So what made this primate worth all the attention? Well, reporters who attended a press conference this morning heard things like this (courtesy of the Guardian)

Nancy Dubuc of the History Channel that will be showing the film said Ida “promised to change everything that we thought we understood about the origins of human life”….

Dr Jorn Hurum, the scientist at the heart of the project, made the most exotic parallels. He screened photographs of the Mona Lisa and the Rosetta Stone, without elucidation, though the implication was clear. He variously described the fossil as the Holy Grail of paleontology and the lost ark of archeology.

I watched this media event balloon as I tried to do other work, but I kept getting distracted. I kept waiting to see an article that sought out some opinions from experts who were not involved in the discovery and analysis of the fossil, which might corroborate that this was indeed the Holy Grail of paleontology, or perhaps something just a wee bit more Earthbound than that. I never found one.

It finally got to the point where I found myself dispatching emails to two prominent primatologists–John Fleagle of SUNY Stony Brook and Chris Beard of the Carnegie Museum–to see what they thought.

Both researchers agreed that it was a lovely fossil, in terms of its exquisite preservation. “It’s really wonderful,” Fleagle said. It’s got bones, fur, and even its last meal in its stomach. Fleagle observed that it will be possible to learn many details about the biology of early primates from Darwinius, down to the stages by which it teeth erupted.

But does this “change everything”? Is it, as the Sun claims, “the missing link in human evolution”?

Actually, I didn’t ask Beard or Fleagle those questions. That would be a bit ridiculous. No scientist, including the co-authors of the Darwinius paper, would ever pretend that they had found a single fossil that was “the” missing link. For some reason reporters (and apparently television producers) are obsessed with the idea, as I wrote about long ago when another primate fossil was touted in a similar fashion. Newly discovered fossils are important instead in helping to resolve the order in which traits evolved, and how groups of species are related to one another. And the more fossils that are discovered, the clearer these pictures become.

Instead, I asked what Fleagle and Beard thought about the actual argument in the paper, which has to do with where humans, apes, and monkeys (known as anthropoids) fit in the primate family tree. Some of the co-authors on the new paper have argued in the past that an extinct group of primates called adapiforms gave rise to anthropoids. Others have favored a common ancestry with small primates known as tarsiers. (Laelaps has a nice history of the debate.) The authors of the new paper argue that Darwinius is an adapiform, but it also has traits that link it with  anthropoids. So, according to them, it’s an early relative of our own anthropoid lineage.

Both Fleagle and Beard were not impressed with this argument. Fleagle observed that, ironically, most of the evidence presented in the paper is old news. Except for the ankle and a few other traits, most of the traits offered to link adapiforms to anthropoids “have been known for decades,” said Fleagle. It’s nice to have those traits all in one primate fossil, but they don’t advance the debate. Fleagle is intrigued by the anthropoid-like ankle of the fossil, but he also notes that it’s “roadkill,” flattened down to a 2-millimeter pancake. He wonders whether their interpretation of the ankle will hold up to scrutiny.

Beard has similar things to say via email.

I’ve been deluged today by journalists regarding this. It is a marketing campaign for the ages. The fossil is nice because it is so complete, but it is a rather vanilla-flavored adapiform that does not differ appreciably from other members of that well-known group of Eocene primates…

Beard was also puzzled that the authors did not compare Darwinius to an important early anthropoid fossil Beard found, known as Eosimias. In fact, he was underwhelmed by the entire comparison of Darwinius to other primates (a phylogenetic analysis):

The phylogenetic analysis is not very complete, and I would certainly interpret many of the characters they do cite very differently than they do. But one of the most shocking things of all about the technical paper is that they found room to cite 89 references, but there is not one mention of Eosimias to be found there. This is bizarre indeed. In a paper that purports to tell us something about anthropoid origins, the authors have conveniently ignored the single most significant fossil that has been published to date. Incomprehensible.

We certainly haven’t heard the last of Darwinius–on that, even the critics agree. But let’s hope that we’ve heard the last of the Holy Grail.

[Title from the great Tom Waits: lyrics, video]

[Image: PLOS One]

Update: In response to comments from Kilian and Brett, I thought I’d add a little more detail here on the evolutionary relationships the authors argue for in the paper. Scientists have long split the primate order into two suborders: strepsirrhines and haplorhines. Strepsirrhines included lemurs, galagos, and a few other species, which all share certain traits, such as a wet nose (the root of the name strepsirrhine). Monkeys, apes, and tarsiers are typically included in the Haplorhines. The Darwinius team argues that their new fossil, Darwinius, is more closely related to haplorhines (which includes monkeys and apes) than it is to strepsirrhines. Therefore, it (and other adapiforms) are ancient relatives of monkeys and apes.

Brett wondered whether there was a tree in the paper. There is, and thanks to PLOS’s open access policy, I can post it right here:

darwinius-tree440.jpgA couple points here:

1. They need to fix the typo in Strepsirrhini.

2. This is what Beard would call “not very complete.” Three branches makes for a pretty bare tree, especially when you consider that there are a fair number of early primate fossils known at this point. Fleagle pointed out to me that there are some early anthropoid fossils that lack some of the traits that supposedly join Darwinius to anthropoids. This could all be sorted out with a detailed phylogenetic analysis, which no doubt someone will carry out. The authors of the study get kudos from Fleagle for providing so much anatomical detail and high-resolution images of the primate, because that will enable lots of scientists to take their own stab at placing Darwinius in the primate tree.

May 19th, 2009 5:57 PM by Carl Zimmer in Darwinius, Evolution, Meta | 61 Comments » | RSS feed | Trackback >

“the model of journalism that we cherish – the tandem until Watergate ‘Carl Zimmer in pre-Internet – may have been thrown to the nettles.”

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This piece in Agence Science Presse appears to be about the future of science journalism. If Google Translate is right, my place in that future appears to be in some type of shrubbery.

Perhaps someone who hasn’t forgotten quite so much of his or her high school French will understand what’s going on here.

May 6th, 2009 1:26 AM by Carl Zimmer in Meta | 14 Comments » | RSS feed | Trackback >

The Swine Flu Is All In Your Head: Is Anyone Awake At the Huffington Post?

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I am told that the Huffington Post represents the future of journalism. I sure hope it’s not the future of science journalism. Some of their posts on swine flu have caused a strange creaky sound in my skull, and for a few days now I haven’t been able to figure it out. It turns out to have been the prelude to a full-out head explosion, which took place when I just read this by New ager Marianne Williamson:

Dear God,
Please take away the swine flu.
Amen

According to Martin Luther King, Jr. there is a power in us more powerful than the power of bullets.

King knew that that power was the power of the Spirit. Call it a religious power, a spiritual power, the power of consciousness or whatever – it has to do with the power of the mind, joined with the power of a Divine Creator.

So don’t be fooled when it comes to this conversation about the swine flu. This flu wasn’t created on the level of the body, because no disease is. It was created on the level of the mind, and it is there that we will root it out at the causal level.

[Bang.]

I invite you to read the rest of the post while I sponge up the bits of gray matter on my desk. She actually gets worse.

What’s particularly confusing about the Huffington Post is that not all of their stuff on science is bad. A piece by conservation biologist Alan Rabinowitz on endangered big cats? Fine by me. But surely if there were a sentient being in charge of the science coverage at the Huffington Post, we wouldn’t have to deal with the swine flu of the mind.

April 28th, 2009 6:57 PM by Carl Zimmer in Meta | 30 Comments » | RSS feed | Trackback >

Correction

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In several posts in my series on George Will’s misleading claims about global warming in the Washington Post, I have referred to the “Arctic Climate Research Center” at the University of Illinois. It has been brought to my attention that no such center actually exists. Instead, there is a group of scientists at the University of Illinois who conduct research on climate in the Arctic (one of whom, Bill Chapman, I interviewed as part of my research).

The phrase “Arctic Climate Research Center” is apparently the concoction of Michael Asher in a January 1 Daily Tech post. George Will has stated that he based his (erroneous) claims about global sea ice on Asher’s post. I can only assume he also got the fictional center from the same source. In writing my own posts on this controversy, I conducted a Google search on the name and ended up on a page with the banner “Arctic Climate Research at the University of Illinois.”

As with any error, I regret this oversight. I am now adding clarifications to all the erroneous posts.

Brad Johnson, who noticed this error, sums the situation up nicely:

Despite publishing criticism of factual errors and distortions in “Dark Green Doomsayers” by Post ombudsman Andrew Alexander, science journalist Chris Mooney, Secretary General of the U.N. World Meteorological Organization Michel Jarraud, Post blogger Andrew Freeman, and Post reporters Juliet Eilperin and Mary Beth Sheridan, the Washington Post has yet to issue a single correction for Will’s column, syndicated in dozens of newspapers nationwide.

Corrections are standard operating procedure at newspapers. It’s fact-checking after the fact, as it were. A few of my science articles for the New York Times have “Correction Appended” branded on them. There’s no shame if the corrections were simple oversights. We all make mistakes, and we ought to live with them. But have we really reached the point now where blogs [shudder] are becoming more conscientious about corrections than the editorial pages of the Washington Post?

April 7th, 2009 8:13 PM by Carl Zimmer in Global Warming, Meta | 13 Comments » | RSS feed | Trackback >

Visions of the Crash

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Fifteen years ago I got my first vision of the future: a pair of black holes, ringed by rainbows of fire, crashed into each other so violently they sent a tsunami through the fabric of space itself.

The vision did not come from angels or mushrooms. I was sitting at my desk, looking at the saucer-sized screen of a MacIIsi. I was not gazing at actual black holes, but a two-dimensional simulation. And it was not  the simulation that astonished me. I was stunned instead by the fact that my Mac was communicating with another computer 800 miles away.

A few days earlier, I had called Ed Seidel, a scientist then at the University of Illinois. I was going to write an article about his research on black holes. He had published a paper with stills from the simulation, and on the phone he tried to conjure the full movie for me. Words were failing him, and he wished I could just see it for myself. He asked if I could use the World Wide Web. I had no idea what he was talking about.

With Seidel’s help, I rigged up a 9600-baud modem at Discover, loaded a program called Mosaic on my computer, and then punched in his web site address. Even the letters http were mysterious to me. Underlined words appeared on the screen, which I realized were links. I could look at Seidel’s papers, his resume, even pictures of his family. And when I clicked on a link for the black holes, the movie slowly appeared on my screen, strip by strip.

As the black holes began to crash into each other, I knew I was seeing something new. But at the time, all I thought I was seeing was a new way for me to do research for stories. No more wasted hours photocopying journal articles at the library. I didn’t realize at the time that I was looking at a journalistic collision in the making, a collision between an old way for people to learn about science and a new way. It would take fifteen years or so before the two finally crashed.

—–

I’ve been thinking a lot about the crash recently, thanks in part to a couple of long phone calls. Geoff Brumfiel of Nature and Curtis Brainerd of the Columbia Journalism Review have published articles on the subject in the past week. During their research, they both called me to get my thoughts. I’m not very good at sound bites, which is a little sad given that I’m always on the hunt for the apt quote. In Brainerd’s piece, I sound a little stoned. On the phone with Brumfiel, I was apparently so hopeless that he had to turn me into a mute journalist, surrounded by lethally pithy bloggers:

“You get a press release that is slightly rehashed by somebody in the newsroom and it goes in the paper! It’s wrong, its sensationalist, it erodes the public trust in scientific endeavour,” says Bora Zivkovic, author of A Blog Around the Clock on ScienceBlogs and an online community manager for the Public Library of Science journals. Myers takes a similar view. “Newspapers realize that they can get their audience by peddling crap instead of real science,” he says. Not surprisingly, those who came to blogging from journalism — such as Carl Zimmer, who writes for a range of publications, including The New York Times, and blogs at Discover — tend to disagree. But Larry Moran, a biochemistry professor at the University of Toronto, Ontario, who blogs at Sandwalk, seemed to speak for many bloggers when he recently wrote “Most of what passes for science journalism is so bad we will be better of [sic] without it”.

Will we be without science journalism soon? Science writing as we’ve known it is certainly changing, and for those of us who do it for a living, some of the latest changes have been scary. CNN recently shut down its science, technology, environment and weather unit. The Boston Globe just stopped running its weekly science and health section. I recently wrote a couple articles for a magazine called Best Life, a men’s lifestyle magazine. I wasn’t sure what it would be like to write for a magazine like that at first, but I was pretty pleased to discover that they didn’t want me to shy away from the science of my stories, such as this one on aging. But I won’t be writing for Best Life any more: they just went belly up.

We science writers have been wailing and gnashing a lot, but I don’t think we should burden other people too much with our economic woes. We like to justify our work by saying it’s important for the public to understand science and to be kept up to date with scientific advances, as well as the ways science affects our lives. I agree that those things are important. But it’s not as if the Founding Fathers established a Federal Department of Science Writing to protect the public’s inalienable right to the stuff.

The science sections, science magazines, and other outlets we see around us today were set up as businesses. They got their start in a big boom in the late 1970s, when the post-Sputnik emphasis on science and the growing advertising for computers and other kinds of technology made publishing stories about science look like a good way to make money. Readers were hungry to learn about new developments in science, as well as the bad effects of some science, such as environmental damage from pollution.

A lot of those sections and magazines are gone now, but they were fading long before bloggers came on the scene. During the 1980s, a lot of science magazines bought each other up. Newspaper science sections have been dwindling ever since they reached a peak of 95 in 1989. By 2005, only 34 science sections were left. There are many reasons for the decline, I suspect. The magazine market got glutted, for example, and advertisers shifted some dollars away from science coverage.

Like all magazines, science magazines are facing some lean times. But I don’t think they face quite as scary a future as newspapers. The entire system by which newspapers used to make money has been knocked out from under them by people with names like Craig. It seems that when newspapers try to cut their costs, science sections are vulnerable. In other cases, the science reporters just end up on the street with everyone else.

But the disaster for any individual science writer may not be so bad for the person on the other end–the one reading about science. Twenty-five years ago, a reader who wanted to keep up with developments in science didn’t have much choice beyond the coverage in the local paper. But now it’s possible to read stories online from all over the world.

This change in technology, from paper to Internet, may mean that our collective hunger for news about science can be met by fewer science writers. That doesn’t mean that there won’t be a demand for good local science writing–a demand that will come from both local and international audiences. But the precise number of science writers left in 10 years will not be decided by a technocrat at the National Science Foundation.

—–

The rise of blogs about science has brought me many pleasures. I’ve particularly liked the astringent criticism of bad science journalism. As soon as a piece is published, scientists who know the lot about the subject can, if necessary, rip a journalist a new one. I personally have been very influenced by Mark Liberman, a linguist at Penn, who has time and again shown how important it is for reporters to pay attention to the statistics in science. What seems at first like stark results–like the difference between the male and female brain–can melt away if you look at the actual data.

But some bloggers go a step further. They claim that these individual cases of journalistic misconduct add up to an indictment of the whole business. Hence, as Moran declares, we can live without science journalists.

It’s odd that many of the people making these pronouncements are scientists themselves–people, in other words, who know that you don’t do science by anecdote. If a blogger sits down in the morning and reads ten stories in a newspaper’s science section and notices that one that makes a howler of a mistake, you know what that blogger will be writing about. Blogs are an outlet for righteous fury. Bloggers are much less likely to write a post that begins, “I read nine articles this morning about science that were fairly accurate and pretty well written.” Ho hum.

The judgment you find in blogs is not just incomplete. It doesn’t even add up to a coherent picture. Take, for example, a recent righteous rant from Ben Goldacre, a British doctor who writes the blog Bad Science. Goldacre is doing fabulous work on his blog, taking on irresponsible sensationalism and misinformation about vaccines, quack medicine, and other offenses. His guns are blazing particularly hot in a recent post about some awful reporting on recent studies on prostate cancer. He concludes with this sweeping condemnation of our trade:

Journalists insist that we need professionals to mediate and explain science. From today’s story, their self belief seems truly laughable.

You’d be forgiven if you read this passage and got an image of all journalists on Earth spontaneously bursting into flame in punishment for their laughable self-importance. But Goldacre is actually only attacking British journalists. To show how badly our British colleagues botched this story, Goldacre contrasts their work to the accurate coverage in American newspapers. Why we American writers possess the powers to see the real story while British reporters are putting themselves out of business Goldacre fails to explain. For whatever reason, British science writers = bad; American science writers = good.

Turn to PZ Myers of Pharyngula this week, and you get a different message. Myers writes about the distress creationists feel when they are met with skepticism from typical British journalists. “Take a bow, any typical British reporters reading this. Could you please come over here and give lessons to typical American reporters?”

So now the scientists are telling us American science writers = bad, British science writers = good?

I don’t mean to single Myers or Goldacre out for special criticism. I don’t dispute the basic notions that the British press botched this cancer story big time or that some American reporters fall into the fair-and-balanced trap when writing about creationists. But the fact remains you can’t get a clear picture of the overall state of science writing from blogs.

There have been some attempts to scientifically measure the accuracy of science journalism, but the ones I’ve come across have only covered a narrow range, like this one on genetics. (It concluded that journalists do a pretty good job, actually.) But to test the crap hypothesis of Myers and others, you’d need something more ambitious. You could get 100 scientists to judge, and give them 1000 articles chosen from the most popular publications–stripped, of course, of any identifying marks that might bias anyone’s judgment. And then you could track the accuracy through time–backwards into whatever Golden Age you want to visit, or forward as economic forces continue to stretch and crush the business.

I don’t know what answer you’d get. There are certainly some dark forces at work in the science media ecosystem these days. Brumfiel rightly points out that journalism-by-press-release is on the rise. In fact, there are some web sites that churn out these press releases as their sole form of “news.” I find this pretty vile. Any outlet that presents a press release as news is making no independent attempt to explain the research involved or to find other scientists who might help create a more objective picture of it. It’s sad that there isn’t any effective backlash that is forcing newspapers or web sites to abandon this practice.

That being said, there is still a lot of good work out there (see the Knight Science Journalism Tracker for some examples). And it’s not as if we were free of bad science coverage twenty years ago. Bat Boy, anyone?

Blogging has certainly opened up a valuable new way for people to point out the errors in science journalism. But we don’t know how good or bad science journalism is overall. And the quality of science journalism doesn’t have that much to do with the quandary of the business right now. You can write as accurately about quantum physics as you want, but if your company just took out $8 billion in loans they can’t pay back,  you and your accuracy may still get fired.

—–

“Science journalism is in decline; science blogging is growing fast. But can the one replace the other, asks Geoff Brumfiel.”

That’s how Brumfiel’s Nature article kicks off. It’s a question that I’ve heard many times in one form or another. But I’ve never been able to figure out exactly what it means.

Let’s imagine that indeed all science journalists around the world spontaneously combusted, leaving behind the bloggers to write about science. Instead of people who research and report articles on a range of subjects, a network of experts would collaborate do the job. Advances in climate research handled by climatologists; advances in studies on spiders handled by arachnologists; and so on.

Will they be able to “replace” the vanished journalists? The question may sound reasonable, but it’s ultimately absurd. It is based on the idea that the Department of Science Writing is planning a shift from journalists to bloggers to fulfill some fixed quantity of writing, just like the Defense Department recalls a platoon of Marines from a war and sends in a new one with different equipment. Bloggers will write, and people who are interested in what they have to say will read them.

A more realistic question is this: how many of the millions of people who read about science in magazines and newspapers will shift their attention over to blogs written by scientists?

I think there could be a modest shift at best. We can’t know for sure what a world of science bloggers would look like. But we do know what a world of proto-bloggers looks like. Before scientists could blog, they wrote reviews for magazines like Scientific American. Scientific American has since moved to a mix of stories–some written by journalists, and some written by scientists but then edited by non-scientists and then illustrated and designed by professionals. Today, there are still some magazines that capture that proto-blogger spirit. But they have very modest readerships. American Scientist, for example, has a circulation of 144,000.

Bigger magazines are not necessarily better, of course. And a junky story in a magazine with 5 million readers is still a junky story. But I doubt that the detail-rich, lecture-like blog posts that a lot of scientists tend to write will reach millions, no matter how many journalists end up out of work.

Brumfiel’s piece is full of interesting stats, but it lacks hard numbers about where people read about science. It would be interesting to see just how many people now rely solely on blogs, having walked away from newspapers and magazines. It would be interesting to see how many people find blogs unpleasant and stick with old-fashioned reporting. But perhaps Brumfiel didn’t bother because it’s a statistical swamp.

Let’s say you read Ben Goldacre. On which side of the blog-MSM divide does that put you? It’s hard to say. If you read Bad Science at badscience.net, I guess you get your information from blogs. But you may read the exact same posts from Goldacre every week in the Guardian. Myers has joined Goldacre there as well. Maybe there was a divide once, but now it’s about as impermeable as a cheesecloth.

—–

Last week I wrote about bats. If I had written about bats ten years ago, I would have had to convey the beauty of their flight with words alone, or with the help of some modest illustrations with arrows to hint at the movement of their bodies. Now I can illustrate my article with high-definition movies. This is a science fiction dream I had in the nineties, which I now get to enjoy in real life. And I don’t need an army of film editors and programmers to help me.

This is the reason I started blogging in the first place. The Internet had matured so much since Ed Seidel revealed it to me that it has become a journalistic laboratory. I can experiment with many different ways of exploring science. Blogs are good not just for combining text and video, I find, but also for pursuing stories that don’t fit neatly into a single post–such as the drawn-out saga of George Will’s fact-checking fiasco over global warming.

But then there’s “George Divoky’s Planet.”

Darcy Frey published this article seven years ago in the New York Times Magazine. When I recently called out to readers of the Loom for examples of great science writing, several people named it. And I recalled it as well. It stands out in my memory more clearly than a vast number of other pieces that I’ve read more recently.

Here’s how it begins:

This is a story about global warming and a scientist named George Divoky, who studies a colony of Arctic seabirds on a remote barrier island off the northern coast of Alaska. I mention all this at the start because a reader might like to come to the point, and what could be more urgent than the very health and durability of this planet we call Earth? However, before George can pursue his inquiry into worldwide climate change; before he can puzzle out the connections between a bunch of penguinesque birds on a flat, snow-covered, icebound island and the escalating threat of droughts, floods and rising global temperatures, he must first mount a defense — his only defense in this frozen, godforsaken place — against the possibility of being consumed, down to the last toenail, by a polar bear while he sleeps. He must first build a fence.

Cooper Island, June 4, 2 o’clock in the morning. The sky is a cold slab of gray, the air temperature hovers in the upper 20’s and the wind — always the wind — howls across hundreds of miles of sea ice with such unremitting force that George has disappeared beneath a hat, two hoods and a thick fleece face mask covering all but his bespectacled eyes. Standing near the three small dome tents that make up his field camp on Cooper, George raises a pair of binoculars and begins to scan for bears. Past the island’s north beach, a wind-scarred plain of sea ice stretches uninterrupted to the pole. To the south, the nearest tree stands 200 miles away on the far side of the Brooks Range. Here, some 330 miles north of the Arctic Circle, with the sun making a constant parabolic journey around the sky, George surveys a view that replicates in all directions: the snow-covered island merges with the sea ice at its shores, the dazzling sheets of sea ice stretch to meet a pale gray dome of sky. Surrounded by a vast, undulating whiteness, he appears to be standing in the middle of the Arctic Ocean. He appears to be standing on the tops of cirrus clouds.

You can’t write a story like this with a bit of embedded code. You can’t write it after spending half an hour reading over a paper in Geophysical Research Letters. You have to go to Cooper Island and stay there, you have to read and talk, you have to write and rewrite.

Frey couldn’t have written the story without back-up: an organization that paid for his plane tickets, that employed editors who helped him make the story better and fact-checkers to search for errors and photographers to add arresting images. The story benefited from being printed in ink on paper–a medium that lets you read several thousand words without feeling as if your eyes are going to fall out of your head. To get the ink on millions of pages, Frey also depended on people running massive printing presses. He depended on the people who sold subscriptions to the paper and wooed advertisers into buying ads. An army stood behind him.

I for one want to read stories like “George Divoky’s Planet” in the future. I wouldn’t mind writing a few of them myself. But if we must say goodbye to the old networks that made these stories possible, we won’t get to read them unless new networks rise to take their place. I don’t know what a new network would look like. They might be slightly retooled versions of the newspapers and magazines we see on the newsstand and online today. Or perhaps writers will end up working as entrepreneurs, selling their stories for all to read on Kindles.

When black holes collide, they can reshape entire galaxies. The little galaxy of journalism is being reshaped as well, but you, dear reader, are not a passive particle enslaved by the laws of physics. You can rail against the shallow and the petty, and throw your support behind the new experiments that deepen your understanding of the world. After the crash, you can help shape the galaxy.

March 25th, 2009 1:22 AM by Carl Zimmer in Meta | 23 Comments » | RSS feed | Trackback >