DISCOVER Magazine. Science, Technology and The Future
Current Issue
Subscribe Today »
  • Renew
  • Give a Gift
  • Archives
  • Customer Service
  • Facebook
  • Twitter
  • Newsletter
  • Health & Medicine
  • Mind & Brain
  • Technology
  • Space
  • Human Origins
  • Living World
  • Environment
  • Physics & Math
  • Video
  • Photos
  • Podcast
  • RSS
Not Exactly Rocket Science
« Wasps, ladybirds and the perils of hiring zombie bodyguards
I’ve got your missing links right here (25 June 2011) »

Switching on genes with a burst of blue light

People with type 2 diabetes don’t respond properly to insulin, a hormone that controls the levels of sugar in their blood. Many of them have to take tablets to keep their sugar levels down, while others rely on insulin injections. But in a Swiss laboratory, there are diabetic mice with a more convenient solution. If they need more insulin, all they need is to bathe under a blue light.

The mice are the work of Haifeng Ye from ETH Zurich, who has developed a way of turning on individual genes with bursts of light. Blue light in particular sets of a chemical chain reaction in the rodents’ bodies that eventually switches on a gene called GLP-1. It tells the pancreas to make more insulin, makes our cells more sensitive to this hormone, and makes us feel full.

Ye’s work is a fusion of two of the most exciting methods in biology: optogenetics, the ability to control events in a cell using bursts of light; and synthetic biology, the building of new biological circuits that don’t exist in nature. In a related editorial, Brian Chow and Ed Boyden (one of the founders of optogenetics) call the new technique “synthetic physiology”.

Ye began with a protein called melanopsin, which controls our body clock. It’s usually found in the cells of our retina, but Ye added it to human kidney cells instead. When melanopsin is hit by blue light, it triggers a surge of calcium. Ye rewired the kidney cells so that this calcium surge activates a gene called NFAT, a switch that can itself turn on other genes. By placing any gene under the control of NFAT, Ye can switch it on for specific chunks of time using beams of blue.

To prove that this could work, Ye engineered his cells so that NFAT switched on the GLP-1 gene. He implanted the cells just under the skin of diabetic mice and placed them in a blue-lit chamber. A few hours later, their insulin levels shot up and their blood sugar levels went down (even if they’d taken a shot of sugar first).

Ye’s study is no cure for diabetes yet. It’s a proof-of-concept – baby steps for a technique that has yet to break into a stride. For a start, surges of calcium do all sorts of things in our cells, so the burst of blue light may have unintended consequences that the team haven’t spotted yet. Martin Fussenegger, who led the study, says that concerns over side effects kept them from starting the project for a long time. “But when we finally did it, we observed no problems at all,” he says.

Ye and Fussenegger are looking for industry partners to develop the technique for use in the clinic. In the meantime, they are focusing on a different application – manufacturing drugs that are difficult to produce. Again, they showed that this is possible.

They rewired their cells to produce a protein called SEAP, by growing them in a vat (a “bioreactor”) and programming a blue light to shine upon. By controlling the patterns and timing of the light, they could create exacting amounts of the protein over a specified period of time. This level of control is a big challenge for the pharmaceutical industry. Ye achieved it with ease, and he did so without having to add any extra ingredients into the growing cells.

These potential uses for synthetic physiology are just scratching the surface. The team could use their technique to switch on genetic production lines that assemble cancer-fighting drugs inside a tumour. They could use it to treat inherited genetic disorders by switching on a working copy of a broken or missing gene in a carefully controlled way. Results like these are important for synthetic biology, a field that has tremendous potential but is often accused of providing little more than parlour tricks.

Reference: Ye, baba, Peng & Fussenegger. 2011. A Synthetic Optogenetic Transcription Device Enhances Blood-Glucose Homeostasis in Mice. Science http://dx.doi.org/10.1126/science.1203535

More on optogenetics: Shedding light on sex and violence in the brain

Share

June 23rd, 2011 by Ed Yong in Medicine & health, Neuroscience and psychology, Technology | 6 comments | RSS feed | Trackback >

6 Responses to “Switching on genes with a burst of blue light”

  1. 1.   Sam McNerney Says:
    June 23rd, 2011 at 2:38 pm

    I just watched Boyden’s Ted Talk on this (http://www.ted.com/talks/ed_boyden.html) and found it fascinating. There seems to be some serious implications for all of this. Interesting stuff, great article!

  2. 2.   Alex Says:
    June 23rd, 2011 at 4:45 pm

    Synthesising new molecular pathways in mice AND using manipulating biological systems to reach new levels of precision in a manufacturing process. These feel like turning points where the potential for further advances is beyond even the scope of our imaginations right now.

  3. 3.   Mutant Dragon Says:
    June 23rd, 2011 at 9:35 pm

    Nice post, but I have a quibble and a comment. Would one really say melanopsin “controls our body clock”….I mean, yeah, as you know, it’s an opsin-type GPCR in photosensitive ganglion cells, and yes, those cells project to the part of the brain that controls circadian rhythms, but it’s a protein that’s part of a pathway… saying it controls the body clock just seems a little like saying that voltage-gated sodium ion channels control neurons. Anyway, minor quibble, I guess, but it’s the first thing I noticed when I read the post, so I figured I might as well say it.

    I agree that synthetic biology has a lot of potential — not so much for biomedical research (although it could be useful there too), but primarily and above all else for agriculture and biofuel. And yes, I can’t deny that some of the stuff people have done so far could accurately be described as parlor tricks, but that’s partly because we’re only just getting started. When Count Alessandro Volta invented the battery, it was just a parlor trick at first. You have to start somewhere.

  4. 4.   Ed Yong Says:
    June 23rd, 2011 at 9:43 pm

    I should probably have put “parlour tricks” in quotes. If you click on the link, you’ll see that the description comes from Justin Gallivan, himself a synthetic biologist, describing his own work. It’s not meant as a condemnation of the field – far from it. It’s intended to say: Good start, now let’s get serious.

  5. 5.   Ed Yong Says:
    June 23rd, 2011 at 9:43 pm

    Oh and I really liked this:

    “These feel like turning points where the potential for further advances is beyond even the scope of our imaginations right now.”

  6. 6.   bruce walck Says:
    July 10th, 2011 at 8:02 am

    Scalable synthetic biology is closer than many realize. I suggest you google the name Intrexon. This entity is run by RJ Kirk, a very successful biotech investor. They have managed to build a customizable engineering platform that already has an impressive DNA parts library. The technology is well beyond tradition gene splicing—more akin to a cutomizable DNA Lego set.

    Platforms such as these will change the very nature of scientific research by both driving down costs and dramatically shortening development time frames. Think Henry Ford meets Moore’s Law.

Leave a Reply





    • About Not Exactly Rocket Science



      Ed Yong is an award-winning British science writer. His work has appeared in New Scientist, the Times, WIRED, the Guardian, Nature and more. Not Exactly Rocket Science is his attempt to talk about the awe-inspiring, beautiful and quirky world of science to as many people as possible.

      My personal website with biography, other writing, speaking engagements, and more

      Some interviews with me
      Some awards that I’ve won
      Who my readers are: 2008, 2009 and 2010 editions
      A complete list of posts from this blog

      Follow me on Twitter or Google+

      Contact me on edyong209[at]googlemail[dot]com

    • Support science writers


      Every month, I choose ten excellent blog posts and donate £3 to their authors. If you want to join me in supporting great science writing, use the first button. Any donations in June will be split evenly between these ten writers.

      If you would like to support this blog in particular, use the second button. For anything you donate, I will match a third and donate it to the month's chosen writers.

    • What others say

      "One of the best sites for in-depth analysis of interesting scientific papers" - The Times

      "One of the smartest science bloggers I read... a prime practitioner among the new generation of scientifically authoritative bloggers" - David Rowan, editor of Wired UK

      "Engaging and jargon-free multimedia storytelling about science and the digital age" - National Academy of Sciences

      "A consistently illuminating home for long, thoughtful, and thorough explorations of science news" - National Association of Science Writers

      "Head and shoulders above many broadsheet hacks" - Ben Goldacre

      "Ed Yong... is made of pure unobtanium and rides TWO Toruks." - Frank Swain

      "Ed Yong is better than chocolate, fairy lights, and kittens chasing yarn. That is all." - Christine Ottery

    • Do you want to be a science writer?

      Read origin stories and advice from over 130 science writers from around the world.
    • Not Exactly Rocket Science content

      RSS Recent Posts

      Recent Posts

      • In a scalding spring, one species of microbe is becoming two
      • Will we ever…? My new column for the BBC
      • Huge set of fossil tracks preserves march of the ancient elephants
      • Flowers regenerated from 30,000-year-old frozen fruits, buried by ancient squirrels
      • Flies drink alcohol to medicate themselves against wasp infections
      • The blue whale – how I met the largest animal that has ever existed
      • I’ve got your missing links right here (18 February 2012)
      • My Sri Lankan adventure – a species list
      Categories

      Categories

      Archives

      Archives

      • February 2012
      • January 2012
      • December 2011
      • November 2011
      • October 2011
      • September 2011
      • August 2011
      • July 2011
      • June 2011
      • May 2011
      • April 2011
      • March 2011
      • February 2011
      • January 2011
      • December 2010
      • November 2010
      • October 2010
      • September 2010
      • August 2010
      • July 2010
      • June 2010
      • May 2010
      • April 2010
      • March 2010
      • February 2010
      • January 2010
      • December 2009
      • November 2009
      • October 2009
      • September 2009
      • August 2009
      • July 2009
      • June 2009
      • May 2009
      • April 2009
      • March 2009
      • February 2009
      • January 2009
      • December 2008
      • November 2008
      • October 2008
      • September 2008
      • August 2008
      • July 2008
      • June 2008
      • May 2008
      • April 2008
      • March 2008
      • February 2008
    • RSS Twitter

    • My wife, who makes it all possible

      Alice.jpg
    • Blogroll

      Science blogs

      Science blogs

      • 80 Beats
      • A Blog Around the Clock
      • Adventures in Ethics and Science
      • Aetiology
      • Alice Bell
      • Ars Technica
      • Arthropoda
      • Atlantic Science
      • Babel's Dawn
      • Bad Astronomy
      • Bad Science
      • BPS Research Digest Blog
      • Cancer Research UK Science Update Blog
      • Child's Play
      • Cocktail Party Physics
      • Collision Detection
      • Culture Dish
      • Culturing Science
      • Deep Sea News
      • Discoblog + NCBI ROFL
      • Dot Earth
      • Dr Petra Boynton
      • Drugmonkey
      • EarthLab
      • Embargo Watch
      • Epiphenom
      • Evolving Thoughts
      • Finite Attention Span
      • Fistful of Science
      • Gary Schwitzer's HealthNewsReview
      • Gene Expression
      • Genetic Future
      • Genomeboy
      • Genomicron
      • Gimpy's Blog
      • Highly Allochthonous
      • Ionian Enchantment
      • JL Vernon Presents American Psico
      • Joanne Loves Science
      • John Pavlus
      • Just a Theory
      • Lab Rat
      • Laelaps
      • Last Word on Nothing
      • Lay Scientist
      • Loom
      • Mark Changizi
      • Mind Hacks
      • Myrmecos
      • Neuroanthropology
      • Neurologica
      • Neuron Culture
      • Neurophilosophy
      • Neurotic Physiology (SciCurious)
      • Neurotribes
      • Obesity Panacea
      • Observations of a Nerd
      • On Becoming a Domestic and Laboratory Goddess
      • Open Minds and Parachutes
      • Political Science (Evan Harris)
      • Predictably Irrational
      • Retraction Watch
      • Save Your Breath for Running Ponies
      • Schooner of Science
      • Science Punk
      • ScienceLine
      • ScienceLush
      • Sentence First
      • Sex, Drugs and Rockin' Venom – Confessions of an Extreme Scientist
      • Skepchick
      • Speakeasy Science
      • Superbug
      • Take as Directed
      • Terra Sigillata
      • Tetrapod Zoology
      • The Artful Amoeba
      • The Chicken or the Egg
      • The Examining Room of Dr Charles
      • The Flying Trilobite
      • The Frontal Cortex
      • The Gleaming Retort
      • The Great Beyond
      • The Intersection
      • The Inverse Square Blog
      • The Millikan Daily
      • The Primate Diaries
      • The Science Project
      • Thoughtomics
      • Thus Spake Zuska
      • TYWKIWDBI
      • Vagina Dentata
      • Voyages Around my Camera
      • Weird Bug Lady
      • White Coat Underground
      • Why Evolution is True
      • Wild Muse
      • Wired Science
      • Words of Science
      • XKCD
      • Zooillogix
      Other blogs

      Other blogs

      • Cafe Philos
      • Miss Cellania
    • NetworkedBlogs
      Blog:
      Not Exactly Rocket Science
      Topics:
      science, biology, news
       
      Follow my blog


  • Kalmbach Publishing Co.

    Copyright © 2012, Kalmbach Publishing Co.

    Privacy - Terms - Reader Services - Subscribe Today - Advertise - About Us